Charm++ parallel programming system

[Thiyagarajan System Analyst <thiyagu AT sastra.edu>]

Thanks for your valuable suggestions. Is NAMD 2.10 is compatible with power series and it is the cluster with 5 power nodes with master node.  I want to build it work in parellel. I have GPFS files system sand IBM LSF.

thanks

L.T

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From: "Laxmikant V Kale" <kale AT illinois.edu>
To: "Philip B Miller" <mille121 AT illinois.edu>, "Thiyagarajan System Analyst" <thiyagu AT sastra.edu>
Cc: "Charm Mailing List" <charm AT cs.illinois.edu>
Sent: Thursday, August 27, 2015 9:13:43 PM
Subject: Re: [charm] RE-CHARM INSTALLATION

And do you really want to use the MPI build for a specific reason?

I think you could pick a direct build, such as net-linux-ppc (depending on what your network is). 

-- 

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Laxmikant (Sanjay) Kale         http://charm.cs.uiuc.edu

Professor, Computer Science     kale AT illinois.edu

201 N. Goodwin Avenue           Ph:  (217) 244-0094

Urbana, IL  61801-2302          

From: Phil Miller <mille121 AT illinois.edu>
Reply-To: Phil Miller <mille121 AT illinois.edu>
Date: Thursday, August 27, 2015 at 10:20 AM
To: Thiyagarajan System Analyst <thiyagu AT sastra.edu>
Cc: Charm Mailing List <charm AT cs.illinois.edu>
Subject: Re: [charm] RE-CHARM INSTALLATION

Please try building without the GCC option. An MPI build should be built with mpicc/mpicxx, which charm's scripts will do by default.

If that doesn't turn out to solve your problem, please note the message about detailed output in the file charmconfig.out - either see if that guides the solution or attach a copy of it in your next mail to the list.

Phil

On Thu, Aug 27, 2015 at 5:03 AM, Thiyagarajan System Analyst <thiyagu AT sastra.edu> wrote:

Dear sir,

Good day. We have IBM power linux as per the specification mentioned  below. I am interested in using Charm & Namd.  I try to install Charm 6.6.1  in power series server and could not be installed. Kindly help me to install the same in the server. I need a proper guidance or material  to do the same. Kindly advice me that CHARM & NAMD is compatible to run on Power series servers.

uname - a

Linux raman-master 2.6.32-431.el6.ppc64 #1 SMP Sun Nov 10 22:17:43 EST 2013 ppc64 ppc64 ppc64 GNU/Linux

command executed & error report

./build charm++ mpi-linux-ppc  gcc  -j16  --with-production

checking "whether synchronization primitives (__sync_add_and_fetch) works in C"... "yes"
checking "whether synchronization primitives (__sync_synchronize) works in C"... "yes"
checking "whether fence intrinsic primitives (__builtin_Xfence_ia32) works in C"... "no"
checking "whether switching TLS register (64-bit) is supported"... "no"
checking "whether build on MPI"... "no"
Error: Can not compile a MPI program
*** Please find detailed output in charmconfig.out ***
gmake[1]: *** [conv-autoconfig.h] Error 1
gmake[1]: Leaving directory `/root/NAMD_2.10_Source/charm-6.6.1/mpi-linux-ppc-gcc/tmp'
gmake: *** [headers] Error 2
-------------------------------------------------
Charm++ NOT BUILT. Either cd into mpi-linux-ppc-gcc/tmp and try
to resolve the problems yourself, visit
http://charm.cs.illinois.edu/
for more information. Otherwise, email the developers at charm AT cs.illinois.edu

regards

L.THIYAGARAJAN
System Analyst
School of Computing
SASTRA University
Thanjavur
Mobile:9994888407
Office :91-4362-264101