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Subject: Charm++ parallel programming system

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[charm] Compiling NAMD


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  • From: 黄须啟 <huangxuqi14 AT mails.ucas.ac.cn>
  • To: charm AT cs.illinois.edu
  • Subject: [charm] Compiling NAMD
  • Date: Mon, 29 Feb 2016 10:55:29 +0800 (GMT+08:00)



Dear Professor:

There is something wrong with compiling NAMD progress for using following command:

which mpirun

/share/apps/intel2012/impi/4.0.3.008/bin64/mpirun

which icc

/share/apps/intel2012/bin/icc

tar xvf NAMD_2.10b2_Source.tar.gz

cd NAMD_2.10b2_Source

tar xvf charm-6.6.1.tar

cd charm-6.6.1

MPICXX="mpicxx -DMPICH_IGNORE_CXX_SEEK" ./build charm++ mpi-linux-x86_64 --with-production

 

it shows charm++ built successfully,i try the following command but it goes wrong.

[xyli@cmohpc charm-6.6.1]$ cd mpi-linux-x86_64/tests/charm++/megatest

[xyli@cmohpc megatest]$ make pgm

../../../bin/charmc  -c megatest.ci

../../../bin/../include/MPIOPTS: line 1: -DMPICH_IGNORE_CXX_SEEK: command not found

../../../bin/charmc  -o megatest.o megatest.C

../../../bin/../include/MPIOPTS: line 1: -DMPICH_IGNORE_CXX_SEEK: command not found

../../../bin/charmc: line 189: eval: -D: invalid option

eval: usage: eval [arg ...]

make: *** [megatest.o] Error 2

 

what shoud i do to deal with it !

I 'm looking forward to your reply!

sincerely

huangxuqi

 






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